KarchinLab

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1. open-cravat open-cravat Public

   A modular annotation tool for genomic variants

   JavaScript 164 48

2. 2020plus 2020plus Public

   Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests

   Python 50 17

3. mhcnuggets mhcnuggets Public

   MHC Class I and Class II neoantigen binding prediction

   Python 38 16

4. bigmhc bigmhc Public

   BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity

   Jupyter Notebook 70 13

5. pictograph pictograph Public

   A Bayesian hierarchical model to build tumor evolutionary trees

   R 5 1

6. open-cravat-dxapp open-cravat-dxapp Public

   open-cravat-dxapp

   Python 1