Issues

• Find kmer locations original sequence

  prophyle/prophex#29 · Filter by author Adamtaranto opened on Mar 22, 2023
  2

• Critical: ProphEx cannot be compiled on M1 (new macs)

  bug
  prophyle/prophex#28 · Filter by author karel-brinda opened on Oct 21, 2022
  3

• Add the BWA-like standard output message

  enhancement
  prophyle/prophex#27 · Filter by author karel-brinda opened on May 1, 2020

• Check the following warnings

  prophyle/prophex#26 · Filter by author karel-brinda opened on Apr 21, 2020

• memory fix

  prophyle/prophex#24 · Filter by author mjsull opened on Feb 21, 2020
  1

• Truncated output in case of very long reads (probably buffer overflow)

  bug
  prophyle/prophex#23 · Filter by author karel-brinda opened on Feb 28, 2019
  1

• bwt2fa: Segmentation fault: 11

  bug
  prophyle/prophex#21 · Filter by author karel-brinda opened on May 31, 2018
  

• k should be an obligatory parameter for prophex klcp

  enhancement
  prophyle/prophex#20 · Filter by author karel-brinda opened on May 15, 2018
  

• 'prophex index -k' doesn't construct k-LCP

  bug
  prophyle/prophex#19 · Filter by author karel-brinda opened on May 15, 2018
  

• Paired-end reads

  Feature request
  prophyle/prophex#17 · Filter by author simonepignotti opened on May 8, 2018

• Add prophex filter

  Feature request
  prophyle/prophex#16 · Filter by author simonepignotti opened on May 8, 2018
  2

  

• Adding a new output format

  Feature request
  prophyle/prophex#14 · Filter by author karel-brinda opened on May 1, 2018
  4

  

• Slow queries for human genome

  bug
  prophyle/prophex#13 · Filter by author simonepignotti opened on May 1, 2018
  16

• Masking repeated k-mers

  Feature request
  prophyle/prophex#7 · Filter by author karel-brinda opened on Mar 27, 2018