All pull requests

Pull requests

• feat: Add PTB-XL dataset and ProtoECGNet model for multi-label ECG classification

  #1323·irvifa opened Oct 21, 2026·

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• docs: point CONTRIBUTING.md to the How to Contribute guide

  status: automatic
  #1322·jhnwu3 opened Oct 20, 2026Collaborator·

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  5

• autoimprove: literature knowledge (KnowledgeBase, citation check, gap report)

  #1321·solarsys opened Oct 20, 2026Collaborator·

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  1

• autoimprove: feature search (alternating cycles, confirmation, pruning, review gate)

  #1320·solarsys opened Oct 20, 2026Collaborator·

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  1

• autoimprove: features as data (FeatureSpec, FeatureSpace, future-blind test)

  #1319·solarsys opened Oct 20, 2026Collaborator·

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• autoimprove: clinical explanation, clinical performance and review

  #1318·solarsys opened Oct 20, 2026Collaborator·

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• autoimprove: explained runs (decision log, one-SE selection, attribution, report)

  #1317·solarsys opened Oct 20, 2026Collaborator·

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• Add pyhealth.autoimprove: guided search over models and training settings

  #1316·solarsys opened Oct 20, 2026Collaborator·

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• MLP and LogisticRegression: embed time series per step, not flattened

  #1315·solarsys opened Oct 20, 2026Collaborator·

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• Document hits@n and mean_rank in multiclass_metrics_fn docstring

  #1314·kshah317 opened Oct 20, 2026·

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• Base XGBoost's shuffle warning on the fit loader, not the dataset flag

  #1313·solarsys opened Oct 18, 2026Collaborator·

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• docs: link the tutorial series to the PyHealth 2.1 Colab notebooks

  #1311·solarsys opened Oct 18, 2026Collaborator·

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• Add missing OMOP tables to the default config

  status: automatic
  #1310·kojikojikojikoji opened Oct 17, 2026·

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• TransformersModel: configurable max_length, long-text windows, pooling

  status: automatic
  #1309·solarsys opened Oct 17, 2026Collaborator·

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  9

• Add a MIMIC-III code-set mode to GAN, with tests and an example notebook

  status: manual
  #1303·margaretdu opened Oct 16, 2026·

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• Change citation from misc to inproceedings format

  #1300·solarsys opened Oct 16, 2026Collaborator·

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• [Feature] Add custom CSV EHR dataset adapter for lightweight onboarding

  status: manual
  #1298·burual opened Oct 15, 2026·

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• Remove only own temp folders in clean_tmpdir

  #1296·konstde00 opened Oct 14, 2026·

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• Closes #913: Add split_by_predefined and document how to port official dataset splits

  #1293·Aprameyaraya opened Oct 14, 2026·

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• Order same-timestamp events by source-file row, so set_task is the same on every cache build

  status: manual
  #1291·solarsys opened Oct 12, 2026Collaborator·

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  9

• Remove unused elementpath check in SHHS sleep staging task

  #1290·cpruijsen opened Oct 12, 2026·

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• Implemented hits@k with a configurable cutoff in multiclass_metrics_f…

  status: automatic
  #1289·Karnis052 opened Oct 11, 2026·

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  1

• Bound SHHS sleep staging epochs to available annotations

  #1288·cpruijsen opened Oct 9, 2026·

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• Add Survival MDN model with SUPPORT reproduction and ablation

  status: automatic
  #1279·nhajela1 opened Oct 8, 2026·

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• Re-lock pixi.lock to match pyproject.toml

  #1276·jhnwu3 opened Oct 6, 2026Collaborator·

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